Thanks - you've made me realise I probably didn't put that question as well as I might. When I ask if Tim can compensate fully for the cover I don't mean in true audiophile terms, i.e so it sounds absolutely identical. I suppose I'm wondering whether I would expect to hear much of a difference between covered (and wound accordingly) pickups and uncovered in normal use.
One of the reasons that made me ask is that I have covered Mules in a LP and uncovered Nailbombs in an Ibanez SA2120FM, which isn't very different to a LP (it has a maple topped mahogany body and set neck). I find the Nailbombs sound more open and "alive" (as well as driving the amp harder).
I know there could be other explanations (different pickups, differences in the guitars, etc.) but it made me wonder whether, if I'd got uncovered Mules, they would have sounded a little more airy like the Nailbombs or whether it would have made little difference because of the way the covered Mule had been wound to compensate anyway?
Maybe I'm thinking too much about these things!