Another thing you could easily do is check that the correct pickup is in the correct position. Take the backplate from the guitar and unscrew the pickups from the front (you'll probably have to remove the strings for this or at least loosen them a hell of a lot) and then check that the wire marked 'neck' or 'bridge' in the back actually goes to the pickup in the correct position. All Bare Knuckle pickups are clearly marked 'neck' and 'bridge' or even 'middle'.
Agreed, though I am unsure if unscrewing the PUs will be nececary. I always hate to do that to strings. If you know which poti or which switch position corresponds to which PU, or should at least you should be able to check with just taking of the back cover and the tap test I described.
Since the tag marking bridge or neck model is usually at the end of the wire you can just see where it goes electronics whise and check if it works with the right pot and in the right switch position.
When you see the wires marked neck go to the poti that was always your bridge one and you get sound in the wrong switch position you know something is wrong.
You can always loosen the strings or take them off, but I think this could be a waste of a perfectly fine set of strings that could be avoided.
This is really basic stuff but anyone who has ever had a panic attack because his computer would not turn on and went on to waste half a day trying to fix it only to realise that the power supply was not connected knows that you gotta rule out the incredibly basic stuff you (or others) would never get wrong xD