Well my ideas for my present guitar changed. I played the guitar and wasn't too thrilled with the finish of the one in the shop and didn't want to chance getting one online which I hadn't played. Anyways I ended up buying an Ibanez SA160F, Focusrite Scarlett 2i2 Interface and a proper set of studio headphones.
The Ibanez SA160F is a Mahogany body, Maple neck and Rosewood fingerboard. Also featuring a vintage trem as to a locking. One thing I should point out is that the SA series actually has a chunkier/thicker mahogany body compared to the S series. Just thought I'd bring this up as people familiar with the S series will know they are extremely thin. This has probably has similar mass to a Stratocaster's body.
For pickups, what I'm looking for is a mega versatile set-up. I've just took out a subscription to Guitar Techniques and Total Guitar, and I intend to learn the magazines cover-to-cover every month. So pickup wise I'm looking for ones that I can throw anything at it from Guns 'N Roses's Welcome to the Jungle, to Jimi Hendrix's All along the Watchtower, to 10-minute Jazz licks. Whether it be metal, jazz, blues, rock, and so on... I've just decided to take a year out from playing a single style and learning to play as much, and as many styles as I can. Again the Set-up is HSS.
Regarding Amp Sim software, I'm a little uneducated in this department, so if someone could point me in the direction of a versatile Amp-Sim package, and possibly any advice on setting it up with my interface, that advice would be greatly appreciated. I intend to do a lot of recording. I'm currently using Mixcraft at the present time.